STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnPphnP: phosphonate metabolism protein PhnP. (250 aa)    
Predicted Functional Partners:
phnJ
Protein phnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
 
 0.976
phnN
Phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
 
 0.952
phnM
phosphono_phnM: phosphonate metabolism protein PhnM.
 
  
 0.948
phnL
CP_lyasePhnL: phosphonate C-P lyase system protein PhnL.
 
  
 0.939
phnI
Bacterial phosphonate metabolism family protein.
 
 
 0.883
phnK
CP_lyasePhnK: phosphonate C-P lyase system protein PhnK.
 
  
 0.833
phnG
phnG_redo: phosphonate C-P lyase system protein PhnG.
 
  
 0.811
phnH
phnH_redo: phosphonate C-P lyase system protein PhnH.
 
  
 0.808
phnF
C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF.
 
  
 0.749
ulaA
PTS system sugar-specific permease component family protein.
      
 0.602
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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