STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pncBNicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. (401 aa)    
Predicted Functional Partners:
CH53_3850
Isochorismatase family protein.
 
 
 0.976
nadR
Trifunctional NAD biosynthesis/regulator protein NadR.
    
 0.952
nadC
nadC: nicotinate-nucleotide diphosphorylase; Belongs to the NadC/ModD family.
   
 0.946
nadD
Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
 
 0.940
ygaD
Protein YgaD; Belongs to the CinA family.
  
 
 0.930
nudC
NADH pyrophosphatase-like rudimentary NUDIX domain protein; Belongs to the Nudix hydrolase family. NudC subfamily.
    
 0.926
mazG
Nucleoside triphosphate pyrophosphohydrolase.
     
 0.919
deoD
deoD: purine nucleoside phosphorylase.
     
 0.917
yjjG
yjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family.
   
 
 0.913
CH53_1552
HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein.
   
 
 0.906
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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