STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hemUfecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (334 aa)    
Predicted Functional Partners:
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.997
hmuT
Hemin-binding periplasmic protein hmuT.
 
 
 0.987
hemS
Hemin transport protein hemS.
 
  
 0.956
fepC
ABC transporter family protein.
 
 
 0.948
fhuC
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
 
 
 0.948
hmuT-2
Hemin-binding periplasmic protein hmuT.
 
 
 0.939
btuF
Periplasmic binding family protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.
 
 
 0.886
shuA
Outer membrane heme receptor ShuA.
 
  
 0.846
hemS-2
Hemin transport protein hemS.
 
  
 0.736
shuA-2
Outer membrane heme receptor ShuA.
 
  
 0.709
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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