Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| btuF | fepC | CH53_958 | CH53_2396 | Periplasmic binding family protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. | ABC transporter family protein. | 0.904 |
| btuF | fhuC | CH53_958 | CH53_966 | Periplasmic binding family protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. | Iron(3+)-hydroxamate import ATP-binding protein FhuC. | 0.906 |
| btuF | hemU | CH53_958 | CH53_1399 | Periplasmic binding family protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. | fecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.960 |
| btuF | hmuV | CH53_958 | CH53_1400 | Periplasmic binding family protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. | Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. | 0.728 |
| btuF | shuA | CH53_958 | CH53_1396 | Periplasmic binding family protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. | Outer membrane heme receptor ShuA. | 0.453 |
| fepC | btuF | CH53_2396 | CH53_958 | ABC transporter family protein. | Periplasmic binding family protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. | 0.904 |
| fepC | fhuD | CH53_2396 | CH53_965 | ABC transporter family protein. | Periplasmic binding family protein. | 0.908 |
| fepC | hemU | CH53_2396 | CH53_1399 | ABC transporter family protein. | fecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.965 |
| fepC | hmuT | CH53_2396 | CH53_1398 | ABC transporter family protein. | Hemin-binding periplasmic protein hmuT. | 0.582 |
| fepC | hmuT-2 | CH53_2396 | CH53_4125 | ABC transporter family protein. | Hemin-binding periplasmic protein hmuT. | 0.586 |
| fhuC | btuF | CH53_966 | CH53_958 | Iron(3+)-hydroxamate import ATP-binding protein FhuC. | Periplasmic binding family protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. | 0.906 |
| fhuC | fhuD | CH53_966 | CH53_965 | Iron(3+)-hydroxamate import ATP-binding protein FhuC. | Periplasmic binding family protein. | 0.998 |
| fhuC | hemU | CH53_966 | CH53_1399 | Iron(3+)-hydroxamate import ATP-binding protein FhuC. | fecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.965 |
| fhuC | hmuT | CH53_966 | CH53_1398 | Iron(3+)-hydroxamate import ATP-binding protein FhuC. | Hemin-binding periplasmic protein hmuT. | 0.626 |
| fhuC | hmuT-2 | CH53_966 | CH53_4125 | Iron(3+)-hydroxamate import ATP-binding protein FhuC. | Hemin-binding periplasmic protein hmuT. | 0.608 |
| fhuD | fepC | CH53_965 | CH53_2396 | Periplasmic binding family protein. | ABC transporter family protein. | 0.908 |
| fhuD | fhuC | CH53_965 | CH53_966 | Periplasmic binding family protein. | Iron(3+)-hydroxamate import ATP-binding protein FhuC. | 0.998 |
| fhuD | hemU | CH53_965 | CH53_1399 | Periplasmic binding family protein. | fecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.864 |
| hemS | hemU | CH53_1397 | CH53_1399 | Hemin transport protein hemS. | fecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.954 |
| hemS | hmuT | CH53_1397 | CH53_1398 | Hemin transport protein hemS. | Hemin-binding periplasmic protein hmuT. | 0.988 |
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