Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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Score
rfaQ_1Glycosyltransferase 9 family protein. (325 aa)    
Predicted Functional Partners:
nuoD
NADH dehydrogenase (quinone), D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 
 0.897
fhaB
Hypothetical protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein.
  
     0.644
CH53_634
beta/Gamma crystallin family protein.
  
     0.630
waaF
heptsyl_trn_II: lipopolysaccharide heptosyltransferase II.
 
  
0.590
CH53_1183
Hypothetical protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein.
  
     0.587
rcsB_2
Bacterial regulatory s, luxR family protein.
  
     0.585
hyaD
Glycosyltransferase like 2 family protein.
  
  
 0.575
rfaE1
Bifunctional protein RfaE, domain I; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
   
 0.572
fdx_1
Hypothetical protein.
  
   0.542
gmhB
D,D-heptose 1,7-bisphosphate phosphatase.
 
   
 0.533
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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