STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
envZ_1HAMP domain protein. (450 aa)    
Predicted Functional Partners:
ompR
Transcriptional regulatory protein ompR.
 
 0.999
mzrA
Hypothetical protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
 
 0.968
ompR_3
Response regulator.
 
 
 0.910
arcB
Sensory box protein.
 
 
0.847
cpxR
Transcriptional regulatory protein CpxR.
 
 
 0.823
barA_2
Sensory box protein.
 
 
 0.808
arcA_1
Hypothetical protein; Transcriptional regulatory, C terminal family protein.
 
 
 0.784
phoP
Transcriptional regulatory protein phoP.
 
 
 0.781
CH53_430
yfcL family protein.
  
     0.699
ompR_1
Response regulator.
 
 
 0.687
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.