STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CH53_1564Hypothetical protein. (87 aa)    
Predicted Functional Partners:
ompX
Outer membrane protein X.
  
     0.772
bhsA
Multiple stress resistance protein BhsA.
  
     0.766
CH53_672
Haloacid dehalogenase-like hydrolase family protein.
  
     0.754
yibL
Hypothetical protein.
  
     0.753
mzrA
Hypothetical protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.749
CH53_2289
yqjK-like family protein.
  
     0.744
aaeX
Hypothetical protein.
  
     0.738
ygdR
Hypothetical protein.
  
    0.733
CH53_567
Hypothetical protein.
  
     0.729
CH53_1710
Hypothetical protein.
  
     0.728
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.