Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glpRGlycerol-3-phosphate regulon repressor. (252 aa)    
Predicted Functional Partners:
fruA
FRU: PTS system, Fru family, IIB component domain protein.
 
  
 0.711
glpG
Rhomboid family protease GlpG; Rhomboid-type serine protease that catalyzes intramembrane proteolysis.
     
 0.662
pfkB
1-phosphofructokinase; pfkB: 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.592
pfkB-2
6-phosphofructokinase isozyme 2; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.561
glpD
FAD dependent oxidoreductase family protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.493
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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