STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
budAAcetolac_decarb: alpha-acetolactate decarboxylase. (261 aa)    
Predicted Functional Partners:
alsS
Acolac_catab: acetolactate synthase, catabolic; Belongs to the TPP enzyme family.
 
 
 0.994
ilvB
Acolac_lg: acetolactate synthase, large subunit, biosynthetic type.
  
 
 0.950
ilvB-2
Acolac_lg: acetolactate synthase, large subunit, biosynthetic type.
  
 
 0.950
ilvB-3
Acolac_lg: acetolactate synthase, large subunit, biosynthetic type.
  
 
 0.950
ilvN
Small subunit; acolac_sm: acetolactate synthase, small subunit.
     
 0.913
ilvN-2
Acetolactate synthase; Isozyme 1 small subunit domain protein.
     
 0.913
ilvM
Acetolactate synthase isozyme 2 small subunit.
     
 0.902
budR_1
Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family.
     
 0.545
poxB
Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family.
  
  
 0.537
pta-2
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
      
 0.416
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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