STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
budAAcetolac_decarb: alpha-acetolactate decarboxylase. (261 aa)    
Predicted Functional Partners:
alsS
Acolac_catab: acetolactate synthase, catabolic; Belongs to the TPP enzyme family.
 
 
 0.996
ilvB
Acolac_lg: acetolactate synthase, large subunit, biosynthetic type.
  
 
 0.951
ilvB-2
Acolac_lg: acetolactate synthase, large subunit, biosynthetic type.
  
 
 0.951
ilvB-3
Acolac_lg: acetolactate synthase, large subunit, biosynthetic type.
  
 
 0.951
ilvN
Small subunit; acolac_sm: acetolactate synthase, small subunit.
     
 0.914
ilvN-2
Acetolactate synthase; Isozyme 1 small subunit domain protein.
     
 0.909
ilvM
Acetolactate synthase isozyme 2 small subunit.
     
 0.903
poxB
Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family.
  
  
 0.626
ackA-3
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
      
 0.546
budR_1
Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family.
     
 0.545
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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