STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (563 aa)    
Predicted Functional Partners:
hutH
hutH: histidine ammonia-lyase.
 
 0.999
hutI
hutI: imidazolonepropionase.
 
 
 0.996
CH53_2441
Amidohydrolase family protein.
  
  
 0.798
hutF
hutF: formiminoglutamate deiminase.
 
  
 0.794
hutC
His_ut_repres: histidine utilization repressor.
 
  
 0.776
hutG
hutG_amidohyd: N-formylglutamate deformylase.
 
  
 0.752
proY_2
Amino acid permease family protein.
  
    0.459
CH53_1658
Antibiotic biosynthesis monooxygenase family protein.
 
     0.456
hisB
hisB_Nterm: histidinol-phosphatase; In the N-terminal section; belongs to the histidinol- phosphatase family.
     
 0.435
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.