Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CH53_2042 | livK1 | CH53_2042 | CH53_3218 | Hypothetical protein. | Periplasmic binding domain protein. | 0.877 |
| CH53_2042 | potG | CH53_2042 | CH53_204 | Hypothetical protein. | Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.630 |
| CH53_2042 | rpmE-2 | CH53_2042 | CH53_2888 | Hypothetical protein. | L31: ribosomal protein L31. | 0.871 |
| CH53_2042 | rpmJ-2 | CH53_2042 | CH53_2887 | Hypothetical protein. | rpmJ_bact: ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.875 |
| CH53_2042 | ulaA | CH53_2042 | CH53_396 | Hypothetical protein. | PTS system sugar-specific permease component family protein. | 0.876 |
| livK1 | CH53_2042 | CH53_3218 | CH53_2042 | Periplasmic binding domain protein. | Hypothetical protein. | 0.877 |
| livK1 | potG | CH53_3218 | CH53_204 | Periplasmic binding domain protein. | Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.661 |
| livK1 | rpmE-2 | CH53_3218 | CH53_2888 | Periplasmic binding domain protein. | L31: ribosomal protein L31. | 0.764 |
| livK1 | rpmJ-2 | CH53_3218 | CH53_2887 | Periplasmic binding domain protein. | rpmJ_bact: ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.815 |
| livK1 | ulaA | CH53_3218 | CH53_396 | Periplasmic binding domain protein. | PTS system sugar-specific permease component family protein. | 0.877 |
| mdl | potG | CH53_2873 | CH53_204 | ABC transporter family protein. | Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.820 |
| potF | potG | CH53_205 | CH53_204 | Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. | Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.991 |
| potF | potH | CH53_205 | CH53_203 | Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. | Putrescine transport system permease protein PotH. | 0.997 |
| potF | potI | CH53_205 | CH53_202 | Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. | Binding--dependent transport system inner membrane component family protein. | 0.999 |
| potG | CH53_2042 | CH53_204 | CH53_2042 | Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Hypothetical protein. | 0.630 |
| potG | livK1 | CH53_204 | CH53_3218 | Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Periplasmic binding domain protein. | 0.661 |
| potG | mdl | CH53_204 | CH53_2873 | Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | ABC transporter family protein. | 0.820 |
| potG | potF | CH53_204 | CH53_205 | Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. | 0.991 |
| potG | potH | CH53_204 | CH53_203 | Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Putrescine transport system permease protein PotH. | 0.997 |
| potG | potI | CH53_204 | CH53_202 | Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Binding--dependent transport system inner membrane component family protein. | 0.997 |
page 1 of 3