potG protein (Yersinia intermedia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

potG

Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (377 aa)

Predicted Functional Partners:

potI

0.999

potH

0.999

potF

0.992

mdl

0.820

modB_2

0.731

sfuB

0.606

pepD

0.532

ybhS

0.532

proB

0.525

pepN

0.523

Your Current Organism:

Yersinia intermedia

NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
mdl	potG	CH53_2873	CH53_204	ABC transporter family protein.	Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.820
modB_2	potF	CH53_3439	CH53_205	Binding--dependent transport system inner membrane component family protein.	Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.896
modB_2	potG	CH53_3439	CH53_204	Binding--dependent transport system inner membrane component family protein.	Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.731
modB_2	potH	CH53_3439	CH53_203	Binding--dependent transport system inner membrane component family protein.	Putrescine transport system permease protein PotH.	0.899
modB_2	sfuB	CH53_3439	CH53_484	Binding--dependent transport system inner membrane component family protein.	Binding--dependent transport system inner membrane component family protein.	0.935
pepD	pepN	CH53_2799	CH53_129	Aa-his-dipept: Xaa-His dipeptidase family protein.	pepN_proteo: aminopeptidase N.	0.954
pepD	potG	CH53_2799	CH53_204	Aa-his-dipept: Xaa-His dipeptidase family protein.	Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.532
pepD	proB	CH53_2799	CH53_2803	Aa-his-dipept: Xaa-His dipeptidase family protein.	Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.	0.630
pepN	pepD	CH53_129	CH53_2799	pepN_proteo: aminopeptidase N.	Aa-his-dipept: Xaa-His dipeptidase family protein.	0.954
pepN	potG	CH53_129	CH53_204	pepN_proteo: aminopeptidase N.	Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.523
pepN	proB	CH53_129	CH53_2803	pepN_proteo: aminopeptidase N.	Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.	0.538
potF	modB_2	CH53_205	CH53_3439	Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Binding--dependent transport system inner membrane component family protein.	0.896
potF	potG	CH53_205	CH53_204	Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.992
potF	potH	CH53_205	CH53_203	Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Putrescine transport system permease protein PotH.	0.995
potF	potI	CH53_205	CH53_202	Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Binding--dependent transport system inner membrane component family protein.	0.999
potG	mdl	CH53_204	CH53_2873	Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	ABC transporter family protein.	0.820
potG	modB_2	CH53_204	CH53_3439	Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Binding--dependent transport system inner membrane component family protein.	0.731
potG	pepD	CH53_204	CH53_2799	Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Aa-his-dipept: Xaa-His dipeptidase family protein.	0.532
potG	pepN	CH53_204	CH53_129	Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	pepN_proteo: aminopeptidase N.	0.523
potG	potF	CH53_204	CH53_205	Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.992

page 1 of 2

Server load: medium (48%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2026

Credits

Access

Info

About