Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gstB-2Hypothetical protein; Glutathione S-transferase, N-terminal domain protein. (206 aa)    
Predicted Functional Partners:
yfcF
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
  
  
 0.924
gstB
Glutathione S-transferase GST-6.0; Belongs to the GST superfamily.
 
  
 
0.919
gshB
Glut_syn: glutathione synthase; Belongs to the prokaryotic GSH synthase family.
 
  
 0.918
yfcG
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
  
  
0.916
btuE
Glutathione peroxidase family protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent.
   
 
 0.915
CH53_1927
Hybrid peroxiredoxin hyPrx5.
   
 0.912
gor
Gluta_reduc_1: glutathione-disulfide reductase.
   
 0.911
ggt
G_glut_trans: gamma-glutamyltransferase.
     
 0.904
CH53_224
HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, IB family protein.
   
   0.605
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
   0.580
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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