STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mlaCPutative phospholipid-binding protein mlaC. (208 aa)    
Predicted Functional Partners:
mlaD
OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD.
 
 0.996
mlaB
STAS domain protein.
 
 
 0.990
mlaE_2
Putative phospholipid ABC transporter permease protein mlaE.
 
 
 0.976
mlaF
ABC transporter family protein.
 
 
 0.950
CH53_475
Mce related family protein.
  
 0.922
mlaA
Putative phospholipid-binding lipoprotein mlaA.
 
 
 
 0.864
CH53_476
ABC transporter family protein.
  
 
 0.864
mlaE_1
ABC transport permease subunit.
  
 
 0.862
tolA
tolA_full: protein TolA.
  
     0.623
lptC
LPS export ABC transporter periplasmic protein LptC; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.
 
    0.621
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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