STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqjCHypothetical protein. (125 aa)    
Predicted Functional Partners:
elaB_1
Hypothetical protein.
 
    0.943
CH53_2289
yqjK-like family protein.
 
    0.743
yqjE
Hypothetical protein.
  
    0.736
psiF
Phosphate starvation-inducible protein psiF.
  
    0.667
osmY_2
BON domain protein.
  
    0.641
yeiU
Inner membrane protein yeiU; Involved in the modification of the lipid A domain of lipopolysaccharides (LPS). Transfers a phosphate group from undecaprenyl pyrophosphate (C55-PP) to lipid A to form lipid A 1- diphosphate. Contributes to the recycling of undecaprenyl phosphate (C55-P); Belongs to the LpxT phosphotransferase family.
  
     0.620
ybaY
Hypothetical protein.
  
    0.620
ygdR
Hypothetical protein.
  
    0.558
wrbA
NAD(P)H:quinone oxidoreductase, type IV; flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV.
   
    0.536
elaB_2
Hypothetical protein.
  
    0.535
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.