STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
torAbisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (826 aa)    
Predicted Functional Partners:
torC
Cytochrome c554 and c-prime family protein; Belongs to the TorC/TorY family.
 
 0.992
dmsB-2
DMSO_dmsB: dimethylsulfoxide reductase, chain B.
 
 
 0.715
dmsB
DMSO_dmsB: dimethylsulfoxide reductase, chain B.
 
 
 0.704
hybB
Putative membrane protein.
  
 
 0.670
ttrB_2
4Fe-4S dicluster domain protein.
 
 
 0.647
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.618
CH53_495
4Fe-4S binding domain protein.
 
  
 0.604
hybA
4Fe-4S dicluster domain protein.
 
 
 0.602
napD
napD family protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
 
 0.589
napF
Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.
 
  
 0.579
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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