STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hybDhupD: hydrogenase expression/formation protein. (163 aa)    
Predicted Functional Partners:
hybC
Hydrogenase-2 large chain; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.980
hybO
Hydrogenase-2 small chain.
 
  
 0.978
hybE
Hydrogenase-2 operon protein hybE.
 
  
 0.946
hybB
Putative membrane protein.
 
  
 0.931
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.928
hypD
hypD: hydrogenase expression/formation protein HypD; Belongs to the HypD family.
 
   
 0.922
hypB
hypB: hydrogenase accessory protein HypB.
 
  
 0.913
hypC
hypC_hupF: hydrogenase assembly chaperone HypC/HupF.
 
  
 0.912
hybA
4Fe-4S dicluster domain protein.
 
  
 0.895
hypE
hypE: hydrogenase expression/formation protein HypE.
 
   
 0.891
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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