STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
eutC_1Ethanolamine ammonia-lyase light chain family protein; Belongs to the EutC family. (265 aa)    
Predicted Functional Partners:
eutB_1
Ethanolamine ammonia lyase large subunit family protein.
 
 0.998
eutB
Ethanolamine ammonia-lyase heavy chain.
 
 0.995
CH53_2517
Ethanolamine utilization EutA family protein.
 
 
 0.956
eutC
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
  
  
 
0.922
glpQ
Glycerophosphoryl diester phosphodiesterase family protein.
     
  0.900
ugpQ_2
Glycerophosphoryl diester phosphodiesterase family protein.
     
  0.900
eat
2A0305: ethanolamine permease.
 
  
 0.807
eutL
microcomp_EutL: microcompartment protein EutL.
 
  
 0.633
pduP_2
Aldehyde dehydrogenase family protein.
  
 
 0.576
CH53_2516
Ethanolamine utilization, EutH family protein.
 
  
 0.534
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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