Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
eutKEthanolamine utilization protein EutK. (184 aa)    
Predicted Functional Partners:
eutN
Ethanolamine utilization protein eutN.
 
 
 0.952
CH53_2514
eutJ: ethanolamine utilization EutJ family protein.
 
  
 0.911
eutL
microcomp_EutL: microcompartment protein EutL.
 
  
 0.903
pduN_1
Ethanolamine utilization EutN/carboxysome family protein.
 
 
 
 0.886
pduP_2
Aldehyde dehydrogenase family protein.
 
  
 0.870
CH53_2522
Respiratory-chain NADH dehydrogenase 51 Kd subunit.
 
  
 0.865
CH53_2517
Ethanolamine utilization EutA family protein.
 
  
 0.829
CH53_2516
Ethanolamine utilization, EutH family protein.
 
  
 0.810
pduT
Microcompartments protein.
 
   
 0.797
eutC
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
  
  
 0.787
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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