STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutFnlpE N-terminal domain protein. (233 aa)    
Predicted Functional Partners:
cpxA
Sensor protein CpxA.
     
 0.918
CH53_2976
Antirestriction family protein.
  
     0.676
yaeJ
RF-1 domain protein.
  
    0.600
yhaH
Hypothetical protein.
  
     0.572
ycdZ
Inner membrane protein ycdZ.
  
     0.569
yaeQ
yaeQ family protein.
       0.562
cpxP
Periplasmic protein CpxP.
  
   
 0.540
yfeY
Hypothetical protein.
  
   
 0.529
icaB
Polysaccharide deacetylase family protein.
  
     0.513
yhbE
Hypothetical protein.
  
     0.487
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.