STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phoRphoR_proteo: phosphate regulon sensor kinase PhoR. (438 aa)    
Predicted Functional Partners:
phoB
phoB: phosphate regulon transcriptional regulatory protein PhoB.
 
 0.999
phoP
Transcriptional regulatory protein phoP.
 
 
 0.913
pstS-2
Phosphate ABC transporter, phosphate-binding protein PstS; ptsS_2: phosphate binding family protein.
  
  
 0.884
phoU
Phosphate transport system regulatory protein PhoU; Part of the phosphate (Pho) regulon, which plays a key role in phosphate homeostasis. PhoU is essential for the repression of the Pho regulon at high phosphate conditions.
 
  
 0.783
cheA
Chemotaxis protein CheA.
     
 0.783
cheB
cheB methylesterase family protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
     
 0.767
cheY
Chemotaxis protein CheY.
 
 
 
 0.747
arcB
Sensory box protein.
 
 
0.699
arcA_1
Hypothetical protein; Transcriptional regulatory, C terminal family protein.
 
 
 0.695
ompR
Transcriptional regulatory protein ompR.
 
 
 0.674
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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