STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amtAmt: ammonium transporter family protein. (429 aa)    
Predicted Functional Partners:
glnK
Nitrogen regulatory protein P-II 2; Belongs to the P(II) protein family.
 
 0.999
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.997
gltB
Glutamine amidotransferases class-II family protein.
 
  
 0.799
glnL
Nitrogen regulation protein NR.
 
 
 0.796
adrA_2
GGDEF: diguanylate cyclase domain protein.
 
 
 
 0.652
zraS
His Kinase A domain protein.
  
 
 0.630
glnA
glnA: glutamine synthetase, type I.
  
  
 0.596
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
 
   
 0.583
amiR
ANTAR domain protein.
  
  
 0.538
acnA
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.533
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.