STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhuC_2ABC transporter family protein. (245 aa)    
Predicted Functional Partners:
mntB_1
ABC 3 transport family protein.
 
 
 0.980
mtsA
Periplasmic solute binding family protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.972
mntB_3
ABC 3 transport family protein.
 
 
 0.953
mntB_4
ABC 3 transport family protein.
 
 
 0.919
CH53_4247
Periplasmic solute binding family protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.913
znuB
ABC 3 transport family protein.
 
 
 0.772
znuA
Periplasmic solute binding family protein.
 
  
 0.743
zinT
yodA lipocalin-like domain protein.
  
  
 0.663
copA_3
ATPase-IB1_Cu: copper-translocating P-type ATPase.
     
 0.438
zur
Ferric uptake regulator family protein; Belongs to the Fur family.
  
  
 0.437
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.