STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rcsB_2Bacterial regulatory s, luxR family protein. (196 aa)    
Predicted Functional Partners:
bvgS_2
His Kinase A domain protein.
 
 
 
 0.868
evgS
Sensor protein evgS.
   
 
 0.773
barA_2
Sensory box protein.
 
 
 
 0.771
barA_1
HAMP domain protein.
   
 
 0.768
CH53_634
beta/Gamma crystallin family protein.
  
     0.763
rcsA_2
Bacterial regulatory s, luxR family protein.
  
   
 0.756
fhaB
Hypothetical protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein.
  
    0.756
mzrA
Hypothetical protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.742
CH53_4010
terB-N family protein.
  
     0.713
CH53_1183
Hypothetical protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein.
  
    0.712
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.