STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CH53_3211Suppressor of fused family protein. (367 aa)    
Predicted Functional Partners:
bvgS_2
His Kinase A domain protein.
  
     0.714
CH53_2025
Hypothetical protein.
  
     0.712
CH53_4004
Bacterial virulence factor family protein.
  
     0.704
CH53_3174
CAAX protease self-immunity family protein.
  
     0.698
CH53_634
beta/Gamma crystallin family protein.
  
     0.693
CH53_4010
terB-N family protein.
  
     0.677
CH53_1548
Putative ATPases of the HSP70 class involved in cell division.
  
     0.670
secM
Secretion monitor family protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.633
bcsE
cellulose_bcsE: cellulose biosynthesis protein BcsE.
  
     0.624
CH53_4002
Putative myosin light chain kinase, smooth muscle.
  
     0.622
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.