STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnE-2phnE: phosphonate ABC transporter, permease protein PhnE. (301 aa)    
Predicted Functional Partners:
phnD
phnD: phosphonate ABC transporter, periplasmic phosphonate binding protein.
 
 
 0.993
phnC
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
  
  0.988
phnE
phnE: phosphonate ABC transporter, permease protein PhnE.
 
  
 
0.982
phnI
Bacterial phosphonate metabolism family protein.
 
  
 0.811
phnH
phnH_redo: phosphonate C-P lyase system protein PhnH.
 
  
 0.808
phnG
phnG_redo: phosphonate C-P lyase system protein PhnG.
 
  
 0.793
phnK
CP_lyasePhnK: phosphonate C-P lyase system protein PhnK.
 
  
 0.786
phnJ
Protein phnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
  
 0.777
phnM
phosphono_phnM: phosphonate metabolism protein PhnM.
 
  
 0.775
phnL
CP_lyasePhnL: phosphonate C-P lyase system protein PhnL.
 
  
 0.753
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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