STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glnPHEQRo_perm_3TM: amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein. (218 aa)    
Predicted Functional Partners:
glnH_2
Bacterial extracellular solute-binding s, 3 family protein.
 0.999
glnQ_2
ABC transporter family protein.
 0.997
artI3
3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein; Belongs to the bacterial solute-binding protein 3 family.
   0.979
artJ
ABC transporter arginine-binding protein 1; Belongs to the bacterial solute-binding protein 3 family.
   0.979
glnH_1
Bacterial extracellular solute-binding s, 3 family protein.
   0.979
fliY_1
Bacterial extracellular solute-binding s, 3 family protein.
   0.974
hisJ_1
Bacterial extracellular solute-binding s, 3 family protein.
   0.906
artM_2
ABC transporter family protein.
 
 0.892
artM_1
ABC transporter family protein.
 
 0.885
gltL
ABC transporter family protein.
 
 0.882
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.