STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
csbCSP: MFS transporter, sugar porter family protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (465 aa)    
Predicted Functional Partners:
iolB
myo_inos_iolB: 5-deoxy-glucuronate isomerase.
  
  
 0.617
fruB
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein.
     
 0.608
iolD
myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.601
iolC
myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase.
  
  
 0.589
glk
Glk: glucokinase; Belongs to the bacterial glucokinase family.
     
 0.465
iolE
Myo-inosose-2 dehydratase; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol). Belongs to the IolE/MocC family.
 
    0.453
idh
Hypothetical protein; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
  
 0.447
eda
Eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein.
     
 0.433
proP_1
Sugar (and other) transporter family protein.
  
   
 0.420
CH53_3457
Hypothetical protein.
       0.409
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.