Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CH53_2312 | ureR | CH53_2312 | CH53_3586 | Glyoxalase-like domain protein; Required for resistance to the phenazine antibiotic. | Helix-turn-helix domain protein. | 0.414 |
| CH53_518 | ureR | CH53_518 | CH53_3586 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.443 |
| CH53_634 | barA_2 | CH53_634 | CH53_75 | beta/Gamma crystallin family protein. | Sensory box protein. | 0.545 |
| CH53_634 | fliT | CH53_634 | CH53_3587 | beta/Gamma crystallin family protein. | Flagellar protein FliT; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus. | 0.555 |
| CH53_634 | ureR | CH53_634 | CH53_3586 | beta/Gamma crystallin family protein. | Helix-turn-helix domain protein. | 0.577 |
| CH53_634 | yplA | CH53_634 | CH53_692 | beta/Gamma crystallin family protein. | Hypothetical protein. | 0.780 |
| barA_2 | CH53_634 | CH53_75 | CH53_634 | Sensory box protein. | beta/Gamma crystallin family protein. | 0.545 |
| barA_2 | fliD | CH53_75 | CH53_3589 | Sensory box protein. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.646 |
| barA_2 | fliS | CH53_75 | CH53_3588 | Sensory box protein. | fliS: flagellar protein FliS. | 0.657 |
| barA_2 | rpfG | CH53_75 | CH53_3585 | Sensory box protein. | HAMP domain protein. | 0.674 |
| barA_2 | ureR | CH53_75 | CH53_3586 | Sensory box protein. | Helix-turn-helix domain protein. | 0.401 |
| fliD | barA_2 | CH53_3589 | CH53_75 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Sensory box protein. | 0.646 |
| fliD | fliS | CH53_3589 | CH53_3588 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | fliS: flagellar protein FliS. | 0.996 |
| fliD | fliT | CH53_3589 | CH53_3587 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein FliT; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus. | 0.967 |
| fliD | ureR | CH53_3589 | CH53_3586 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Helix-turn-helix domain protein. | 0.409 |
| fliS | barA_2 | CH53_3588 | CH53_75 | fliS: flagellar protein FliS. | Sensory box protein. | 0.657 |
| fliS | fliD | CH53_3588 | CH53_3589 | fliS: flagellar protein FliS. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.996 |
| fliS | fliT | CH53_3588 | CH53_3587 | fliS: flagellar protein FliS. | Flagellar protein FliT; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus. | 0.968 |
| fliS | ureR | CH53_3588 | CH53_3586 | fliS: flagellar protein FliS. | Helix-turn-helix domain protein. | 0.409 |
| fliT | CH53_634 | CH53_3587 | CH53_634 | Flagellar protein FliT; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus. | beta/Gamma crystallin family protein. | 0.555 |
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