STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcyDD-cysteine desulfhydrase; Catalyzes the alpha,beta-elimination reaction of D-cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine; Belongs to the ACC deaminase/D-cysteine desulfhydrase family. (330 aa)    
Predicted Functional Partners:
metC
cysta_beta_ly_B: cystathionine beta-lyase.
  
  
 0.914
malY
C_S_lyase_PatB: C-S lyase family protein.
    
  0.905
metB_2
cys/Met metabolism PLP-dependent enzyme family protein.
     
 0.900
sseA
Rhodanese-like domain protein.
    
  0.900
metB-2
O-succinylhomoserine (thiol)-lyase; Cystathionine gamma-lyase-like protein.
     
 0.900
fliY_1
Bacterial extracellular solute-binding s, 3 family protein.
 
  
 0.753
yecS
Inner membrane amino-acid ABC transporter permease protein yecS.
  
  
 0.537
artM_2
ABC transporter family protein.
  
    0.519
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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