Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CH53_3844 | dps | CH53_3844 | CH53_3245 | Hypothetical protein; prkA serine kinase C-terminal domain protein. | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | 0.583 |
| CH53_3844 | elaB_1 | CH53_3844 | CH53_2291 | Hypothetical protein; prkA serine kinase C-terminal domain protein. | Hypothetical protein. | 0.606 |
| CH53_3844 | elaB_2 | CH53_3844 | CH53_359 | Hypothetical protein; prkA serine kinase C-terminal domain protein. | Hypothetical protein. | 0.476 |
| CH53_3844 | wrbA | CH53_3844 | CH53_3603 | Hypothetical protein; prkA serine kinase C-terminal domain protein. | NAD(P)H:quinone oxidoreductase, type IV; flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV. | 0.510 |
| CH53_3844 | wrbA_2 | CH53_3844 | CH53_2952 | Hypothetical protein; prkA serine kinase C-terminal domain protein. | NADPH-dependent FMN reductase family protein. | 0.431 |
| CH53_3844 | yqjC | CH53_3844 | CH53_2292 | Hypothetical protein; prkA serine kinase C-terminal domain protein. | Hypothetical protein. | 0.521 |
| dps | CH53_3844 | CH53_3245 | CH53_3844 | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | Hypothetical protein; prkA serine kinase C-terminal domain protein. | 0.583 |
| dps | elaB_1 | CH53_3245 | CH53_2291 | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | Hypothetical protein. | 0.641 |
| dps | elaB_2 | CH53_3245 | CH53_359 | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | Hypothetical protein. | 0.660 |
| dps | wrbA | CH53_3245 | CH53_3603 | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | NAD(P)H:quinone oxidoreductase, type IV; flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV. | 0.645 |
| dps | wrbA_2 | CH53_3245 | CH53_2952 | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | NADPH-dependent FMN reductase family protein. | 0.597 |
| dps | yqjC | CH53_3245 | CH53_2292 | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | Hypothetical protein. | 0.487 |
| elaB_1 | CH53_3844 | CH53_2291 | CH53_3844 | Hypothetical protein. | Hypothetical protein; prkA serine kinase C-terminal domain protein. | 0.606 |
| elaB_1 | dps | CH53_2291 | CH53_3245 | Hypothetical protein. | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | 0.641 |
| elaB_1 | elaB_2 | CH53_2291 | CH53_359 | Hypothetical protein. | Hypothetical protein. | 0.877 |
| elaB_1 | wrbA | CH53_2291 | CH53_3603 | Hypothetical protein. | NAD(P)H:quinone oxidoreductase, type IV; flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV. | 0.643 |
| elaB_1 | yqjC | CH53_2291 | CH53_2292 | Hypothetical protein. | Hypothetical protein. | 0.943 |
| elaB_2 | CH53_3844 | CH53_359 | CH53_3844 | Hypothetical protein. | Hypothetical protein; prkA serine kinase C-terminal domain protein. | 0.476 |
| elaB_2 | dps | CH53_359 | CH53_3245 | Hypothetical protein. | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | 0.660 |
| elaB_2 | elaB_1 | CH53_359 | CH53_2291 | Hypothetical protein. | Hypothetical protein. | 0.877 |
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