STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dmsA1_2narG: nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1250 aa)    
Predicted Functional Partners:
narH
narH: nitrate reductase, beta subunit.
 
 0.999
narJ
narJ: nitrate reductase molybdenum cofactor assembly chaperone.
 
 
 0.999
narI
narI: respiratory nitrate reductase, gamma subunit.
 
 0.999
narK
2A0108: nitrite transporter family protein.
 
 
 0.997
nirB
nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.970
nirD
Nitrite reductase [NAD(P)H] small subunit.
  
 
 0.953
napA
Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
  
 
 0.945
napB
Nitrate reductase cytochrome c-type subunit family protein; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
     
 0.909
norW
Nitric oxide reductase FlRd-NAD(+) reductase; Belongs to the FAD-dependent oxidoreductase family.
  
  
 0.719
fsrB
Globin family protein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
  
  
 0.678
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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