Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| deoB | dxs-2 | CH53_1116 | CH53_829 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Transketolase, C-terminal domain protein. | 0.900 |
| deoB | pgm | CH53_1116 | CH53_3119 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific. | 0.900 |
| deoB | prs | CH53_1116 | CH53_3760 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.918 |
| deoB | rbsK | CH53_1116 | CH53_1790 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.900 |
| deoB | rbsK-2 | CH53_1116 | CH53_4015 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.900 |
| deoB | rpiA | CH53_1116 | CH53_2612 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.963 |
| deoB | rpiB | CH53_1116 | CH53_3042 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | rpiB: ribose 5-phosphate isomerase B. | 0.908 |
| deoB | tkt | CH53_1116 | CH53_2604 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.912 |
| deoB | tktB | CH53_1116 | CH53_830 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | 0.912 |
| dxs-2 | deoB | CH53_829 | CH53_1116 | Transketolase, C-terminal domain protein. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.900 |
| dxs-2 | pgm | CH53_829 | CH53_3119 | Transketolase, C-terminal domain protein. | Pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific. | 0.900 |
| dxs-2 | prs | CH53_829 | CH53_3760 | Transketolase, C-terminal domain protein. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.911 |
| dxs-2 | rbsK | CH53_829 | CH53_1790 | Transketolase, C-terminal domain protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.903 |
| dxs-2 | rbsK-2 | CH53_829 | CH53_4015 | Transketolase, C-terminal domain protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.903 |
| dxs-2 | rpiA | CH53_829 | CH53_2612 | Transketolase, C-terminal domain protein. | Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.911 |
| dxs-2 | rpiB | CH53_829 | CH53_3042 | Transketolase, C-terminal domain protein. | rpiB: ribose 5-phosphate isomerase B. | 0.928 |
| dxs-2 | tkt | CH53_829 | CH53_2604 | Transketolase, C-terminal domain protein. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.927 |
| dxs-2 | tktB | CH53_829 | CH53_830 | Transketolase, C-terminal domain protein. | Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein. | 0.999 |
| pgm | deoB | CH53_3119 | CH53_1116 | Pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.900 |
| pgm | dxs-2 | CH53_3119 | CH53_829 | Pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific. | Transketolase, C-terminal domain protein. | 0.900 |
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