STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yeaDAldose 1-epimerase family protein; Belongs to the glucose-6-phosphate 1-epimerase family. (291 aa)    
Predicted Functional Partners:
pgm
Pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific.
   
 
 0.919
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.916
glk
Glk: glucokinase; Belongs to the bacterial glucokinase family.
    
  0.912
chbF
Hypothetical protein; Family 4 glycosyl hydrolase C-terminal domain protein.
     
  0.900
ascB_3
Glycosyl hydrolase 1 family protein; Belongs to the glycosyl hydrolase 1 family.
     
 0.900
malX_2
pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component domain protein.
     
  0.900
bglA
Glycosyl hydrolase 1 family protein; Belongs to the glycosyl hydrolase 1 family.
     
 0.900
gmuD_1
Glycosyl hydrolase 1 family protein; Belongs to the glycosyl hydrolase 1 family.
     
 0.900
malX_1
EIIB_glc: PTS system, glucose-like IIB component domain protein.
     
  0.900
ptsG
PTS system glucose-specific EIICB component.
     
  0.900
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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