Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroC | menF | CH53_434 | CH53_358 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.938 |
| aroC | pabB | CH53_434 | CH53_4349 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | pabB: aminodeoxychorismate synthase, component I. | 0.947 |
| aroC | pheA | CH53_434 | CH53_799 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | CM_P_1: chorismate mutase. | 0.982 |
| aroC | trpA | CH53_434 | CH53_3894 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.855 |
| aroC | trpB | CH53_434 | CH53_3895 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.743 |
| aroC | trpC | CH53_434 | CH53_3896 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Indole-3-glycerol phosphate synthase family protein; Belongs to the TrpC family. | 0.624 |
| aroC | trpD | CH53_434 | CH53_3897 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.692 |
| aroC | trpE | CH53_434 | CH53_3899 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | trpE_proteo: anthranilate synthase component I. | 0.969 |
| aroC | trpG | CH53_434 | CH53_3898 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase component II. | 0.988 |
| aroC | tyrA | CH53_434 | CH53_800 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | T-protein. | 0.997 |
| menF | aroC | CH53_358 | CH53_434 | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.938 |
| menF | pabB | CH53_358 | CH53_4349 | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | pabB: aminodeoxychorismate synthase, component I. | 0.404 |
| menF | pheA | CH53_358 | CH53_799 | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | CM_P_1: chorismate mutase. | 0.921 |
| menF | trpA | CH53_358 | CH53_3894 | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.697 |
| menF | trpB | CH53_358 | CH53_3895 | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.675 |
| menF | trpC | CH53_358 | CH53_3896 | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | Indole-3-glycerol phosphate synthase family protein; Belongs to the TrpC family. | 0.701 |
| menF | trpD | CH53_358 | CH53_3897 | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.742 |
| menF | trpE | CH53_358 | CH53_3899 | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | trpE_proteo: anthranilate synthase component I. | 0.900 |
| menF | trpG | CH53_358 | CH53_3898 | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | Anthranilate synthase component II. | 0.956 |
| menF | tyrA | CH53_358 | CH53_800 | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | T-protein. | 0.912 |
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