STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malX_1EIIB_glc: PTS system, glucose-like IIB component domain protein. (536 aa)    
Predicted Functional Partners:
crr
Glucose-specific phosphotransferase enzyme IIA component.
 0.999
aglB
6-phospho-alpha-glucosidase.
 
 
 0.935
aglA
PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component domain protein.
 
 
0.930
ptsH
Phosphocarrier protein HPr.
 
 
 0.928
ptsG
PTS system glucose-specific EIICB component.
 
 
0.925
glk
Glk: glucokinase; Belongs to the bacterial glucokinase family.
    
 0.923
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.921
malX_2
pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component domain protein.
 
 
0.919
pgm
Pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific.
    
 0.917
chb
Chitobiase.
  
  
 0.907
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.