Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CH53_2270 | gyrI | CH53_2270 | CH53_4019 | Radical SAM superfamily protein. | gyrI-like small molecule binding domain protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | 0.460 |
| CH53_3100 | gyrI | CH53_3100 | CH53_4019 | Outer membrane porin, OprD family protein. | gyrI-like small molecule binding domain protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | 0.467 |
| CH53_3100 | yaeP | CH53_3100 | CH53_2742 | Outer membrane porin, OprD family protein. | Hypothetical protein. | 0.649 |
| CH53_4020 | gyrI | CH53_4020 | CH53_4019 | Hypothetical protein. | gyrI-like small molecule binding domain protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | 0.518 |
| CH53_634 | CH53_703 | CH53_634 | CH53_703 | beta/Gamma crystallin family protein. | Hypothetical protein. | 0.670 |
| CH53_634 | bcsE | CH53_634 | CH53_1638 | beta/Gamma crystallin family protein. | cellulose_bcsE: cellulose biosynthesis protein BcsE. | 0.443 |
| CH53_634 | esaI | CH53_634 | CH53_2504 | beta/Gamma crystallin family protein. | Acyl-homoserine-lactone synthase. | 0.555 |
| CH53_634 | gyrI | CH53_634 | CH53_4019 | beta/Gamma crystallin family protein. | gyrI-like small molecule binding domain protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | 0.458 |
| CH53_634 | lacZ_2 | CH53_634 | CH53_76 | beta/Gamma crystallin family protein. | Glycosyl hydrolases 2 family protein; Belongs to the glycosyl hydrolase 2 family. | 0.565 |
| CH53_634 | rob_2 | CH53_634 | CH53_3933 | beta/Gamma crystallin family protein. | Helix-turn-helix domain protein. | 0.429 |
| CH53_703 | CH53_634 | CH53_703 | CH53_634 | Hypothetical protein. | beta/Gamma crystallin family protein. | 0.670 |
| CH53_703 | gyrI | CH53_703 | CH53_4019 | Hypothetical protein. | gyrI-like small molecule binding domain protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | 0.482 |
| bcsE | CH53_634 | CH53_1638 | CH53_634 | cellulose_bcsE: cellulose biosynthesis protein BcsE. | beta/Gamma crystallin family protein. | 0.443 |
| bcsE | gyrI | CH53_1638 | CH53_4019 | cellulose_bcsE: cellulose biosynthesis protein BcsE. | gyrI-like small molecule binding domain protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | 0.467 |
| esaI | CH53_634 | CH53_2504 | CH53_634 | Acyl-homoserine-lactone synthase. | beta/Gamma crystallin family protein. | 0.555 |
| esaI | gyrI | CH53_2504 | CH53_4019 | Acyl-homoserine-lactone synthase. | gyrI-like small molecule binding domain protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | 0.448 |
| gyrI | CH53_2270 | CH53_4019 | CH53_2270 | gyrI-like small molecule binding domain protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | Radical SAM superfamily protein. | 0.460 |
| gyrI | CH53_3100 | CH53_4019 | CH53_3100 | gyrI-like small molecule binding domain protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | Outer membrane porin, OprD family protein. | 0.467 |
| gyrI | CH53_4020 | CH53_4019 | CH53_4020 | gyrI-like small molecule binding domain protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | Hypothetical protein. | 0.518 |
| gyrI | CH53_634 | CH53_4019 | CH53_634 | gyrI-like small molecule binding domain protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | beta/Gamma crystallin family protein. | 0.458 |
page 1 of 2