Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
zntBcorA-like Mg2+ transporter family protein. (327 aa)    
Predicted Functional Partners:
zitB
CDF: cation diffusion facilitator transporter family protein.
 
   
 0.621
fieF
Ferrous-iron efflux pump FieF; Cation-efflux transporter that may have a role in detoxification.
 
  
 0.536
CH53_1311
Hypothetical protein.
 
     0.464
mukB
Hypothetical protein; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily.
  
     0.448
yigZ
Hypothetical protein.
  
    0.439
mppA
Periplasmic murein peptide-binding protein.
  
    0.428
kefA_1
Mechanosensitive ion channel family protein.
 
   
 0.403
znuA
Periplasmic solute binding family protein.
  
   
 0.403
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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