Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CH53_3950 | dlgD | CH53_3950 | CH53_4238 | Hypothetical protein. | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | 0.746 |
| CH53_4236 | dlgD | CH53_4236 | CH53_4238 | Periplasmic binding domain protein. | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | 0.432 |
| CH53_4236 | gnl | CH53_4236 | CH53_4237 | Periplasmic binding domain protein. | SMP-30/Gluconolaconase/LRE-like region family protein. | 0.853 |
| CH53_4236 | sgbH | CH53_4236 | CH53_4240 | Periplasmic binding domain protein. | 3-keto-L-gulonate-6-phosphate decarboxylase sgbH. | 0.432 |
| CH53_4236 | ulaE_2 | CH53_4236 | CH53_4241 | Periplasmic binding domain protein. | Xylose isomerase-like TIM barrel family protein. | 0.408 |
| dlgD | CH53_3950 | CH53_4238 | CH53_3950 | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | Hypothetical protein. | 0.746 |
| dlgD | CH53_4236 | CH53_4238 | CH53_4236 | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | Periplasmic binding domain protein. | 0.432 |
| dlgD | gnl | CH53_4238 | CH53_4237 | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | SMP-30/Gluconolaconase/LRE-like region family protein. | 0.548 |
| dlgD | lyx | CH53_4238 | CH53_4239 | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | L-xylulose/3-keto-L-gulonate kinase; Belongs to the FGGY kinase family. | 0.954 |
| dlgD | lyx_1 | CH53_4238 | CH53_855 | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | Hypothetical protein; FGGY family of carbohydrate kinase, N-terminal domain protein; Belongs to the FGGY kinase family. | 0.918 |
| dlgD | ncs1 | CH53_4238 | CH53_67 | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | Ncs1: NCS1 nucleoside transporter family protein. | 0.415 |
| dlgD | sgbH | CH53_4238 | CH53_4240 | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | 3-keto-L-gulonate-6-phosphate decarboxylase sgbH. | 0.548 |
| dlgD | ulaE_2 | CH53_4238 | CH53_4241 | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | Xylose isomerase-like TIM barrel family protein. | 0.558 |
| dlgD | uxuA | CH53_4238 | CH53_251 | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.560 |
| dlgD | ylbA | CH53_4238 | CH53_63 | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | Hypothetical protein. | 0.449 |
| gnl | CH53_4236 | CH53_4237 | CH53_4236 | SMP-30/Gluconolaconase/LRE-like region family protein. | Periplasmic binding domain protein. | 0.853 |
| gnl | dlgD | CH53_4237 | CH53_4238 | SMP-30/Gluconolaconase/LRE-like region family protein. | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | 0.548 |
| gnl | lyx | CH53_4237 | CH53_4239 | SMP-30/Gluconolaconase/LRE-like region family protein. | L-xylulose/3-keto-L-gulonate kinase; Belongs to the FGGY kinase family. | 0.408 |
| lyx | dlgD | CH53_4239 | CH53_4238 | L-xylulose/3-keto-L-gulonate kinase; Belongs to the FGGY kinase family. | 2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate. | 0.954 |
| lyx | gnl | CH53_4239 | CH53_4237 | L-xylulose/3-keto-L-gulonate kinase; Belongs to the FGGY kinase family. | SMP-30/Gluconolaconase/LRE-like region family protein. | 0.408 |
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