Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| amiB | envC | CH53_1341 | CH53_1871 | N-acetylmuramoyl-L-alanine amidase family protein. | Peptidase M23 family protein. | 0.798 |
| amiB | msrC | CH53_1341 | CH53_4277 | N-acetylmuramoyl-L-alanine amidase family protein. | GAF domain protein. | 0.414 |
| amiB | prc | CH53_1341 | CH53_4275 | N-acetylmuramoyl-L-alanine amidase family protein. | Tail-specific protease; Belongs to the peptidase S41A family. | 0.520 |
| amiB | prcA | CH53_1341 | CH53_345 | N-acetylmuramoyl-L-alanine amidase family protein. | Proconvertase P-domain protein. | 0.529 |
| amiB | proQ | CH53_1341 | CH53_4276 | N-acetylmuramoyl-L-alanine amidase family protein. | proP effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family. | 0.402 |
| envC | amiB | CH53_1871 | CH53_1341 | Peptidase M23 family protein. | N-acetylmuramoyl-L-alanine amidase family protein. | 0.798 |
| envC | prc | CH53_1871 | CH53_4275 | Peptidase M23 family protein. | Tail-specific protease; Belongs to the peptidase S41A family. | 0.560 |
| envC | rseP | CH53_1871 | CH53_2727 | Peptidase M23 family protein. | RIP metalloprotease RseP. | 0.425 |
| htpX | prc | CH53_4274 | CH53_4275 | Protease HtpX; Belongs to the peptidase M48B family. | Tail-specific protease; Belongs to the peptidase S41A family. | 0.453 |
| msrC | amiB | CH53_4277 | CH53_1341 | GAF domain protein. | N-acetylmuramoyl-L-alanine amidase family protein. | 0.414 |
| msrC | prc | CH53_4277 | CH53_4275 | GAF domain protein. | Tail-specific protease; Belongs to the peptidase S41A family. | 0.619 |
| msrC | proQ | CH53_4277 | CH53_4276 | GAF domain protein. | proP effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family. | 0.724 |
| nifJ | prc | CH53_4046 | CH53_4275 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Tail-specific protease; Belongs to the peptidase S41A family. | 0.635 |
| nlpI | prc | CH53_1274 | CH53_4275 | Lipoprotein nlpI; May be involved in cell division. | Tail-specific protease; Belongs to the peptidase S41A family. | 0.789 |
| nlpI | proQ | CH53_1274 | CH53_4276 | Lipoprotein nlpI; May be involved in cell division. | proP effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family. | 0.757 |
| pheT | prc | CH53_4142 | CH53_4275 | pheT_bact: phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Tail-specific protease; Belongs to the peptidase S41A family. | 0.501 |
| prc | amiB | CH53_4275 | CH53_1341 | Tail-specific protease; Belongs to the peptidase S41A family. | N-acetylmuramoyl-L-alanine amidase family protein. | 0.520 |
| prc | envC | CH53_4275 | CH53_1871 | Tail-specific protease; Belongs to the peptidase S41A family. | Peptidase M23 family protein. | 0.560 |
| prc | htpX | CH53_4275 | CH53_4274 | Tail-specific protease; Belongs to the peptidase S41A family. | Protease HtpX; Belongs to the peptidase M48B family. | 0.453 |
| prc | msrC | CH53_4275 | CH53_4277 | Tail-specific protease; Belongs to the peptidase S41A family. | GAF domain protein. | 0.619 |
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