Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CH53_3749 | mdtL | CH53_3749 | CH53_3840 | Sugar (and other) transporter family protein. | efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily protein. | 0.675 |
CH53_3749 | stp_2 | CH53_3749 | CH53_4281 | Sugar (and other) transporter family protein. | Major Facilitator Superfamily protein. | 0.603 |
emrA | stp_2 | CH53_2765 | CH53_4281 | 8a0101: efflux pump membrane family protein. | Major Facilitator Superfamily protein. | 0.642 |
mdtL | CH53_3749 | CH53_3840 | CH53_3749 | efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily protein. | Sugar (and other) transporter family protein. | 0.675 |
mdtL | stp_2 | CH53_3840 | CH53_4281 | efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily protein. | Major Facilitator Superfamily protein. | 0.499 |
nodD2 | stp_2 | CH53_4280 | CH53_4281 | Bacterial regulatory, Fis family protein; Belongs to the LysR transcriptional regulatory family. | Major Facilitator Superfamily protein. | 0.691 |
stp_2 | CH53_3749 | CH53_4281 | CH53_3749 | Major Facilitator Superfamily protein. | Sugar (and other) transporter family protein. | 0.603 |
stp_2 | emrA | CH53_4281 | CH53_2765 | Major Facilitator Superfamily protein. | 8a0101: efflux pump membrane family protein. | 0.642 |
stp_2 | mdtL | CH53_4281 | CH53_3840 | Major Facilitator Superfamily protein. | efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily protein. | 0.499 |
stp_2 | nodD2 | CH53_4281 | CH53_4280 | Major Facilitator Superfamily protein. | Bacterial regulatory, Fis family protein; Belongs to the LysR transcriptional regulatory family. | 0.691 |