Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CH53_4382 | hdeB_1 | CH53_4382 | CH53_4381 | Hypothetical protein. | hdeA/HdeB family protein; Required for optimal acid stress protection, which is important for survival of enteric bacteria in the acidic environment of the host stomach. Exhibits a chaperone-like activity at acidic pH by preventing the aggregation of many different periplasmic proteins. Belongs to the HdeB family. | 0.522 |
| gadC | hdeB_1 | CH53_47 | CH53_4381 | Amino acid permease family protein. | hdeA/HdeB family protein; Required for optimal acid stress protection, which is important for survival of enteric bacteria in the acidic environment of the host stomach. Exhibits a chaperone-like activity at acidic pH by preventing the aggregation of many different periplasmic proteins. Belongs to the HdeB family. | 0.624 |
| gadC | hdeD | CH53_47 | CH53_2315 | Amino acid permease family protein. | Protein hdeD. | 0.850 |
| hdeB_1 | CH53_4382 | CH53_4381 | CH53_4382 | hdeA/HdeB family protein; Required for optimal acid stress protection, which is important for survival of enteric bacteria in the acidic environment of the host stomach. Exhibits a chaperone-like activity at acidic pH by preventing the aggregation of many different periplasmic proteins. Belongs to the HdeB family. | Hypothetical protein. | 0.522 |
| hdeB_1 | gadC | CH53_4381 | CH53_47 | hdeA/HdeB family protein; Required for optimal acid stress protection, which is important for survival of enteric bacteria in the acidic environment of the host stomach. Exhibits a chaperone-like activity at acidic pH by preventing the aggregation of many different periplasmic proteins. Belongs to the HdeB family. | Amino acid permease family protein. | 0.624 |
| hdeB_1 | hdeD | CH53_4381 | CH53_2315 | hdeA/HdeB family protein; Required for optimal acid stress protection, which is important for survival of enteric bacteria in the acidic environment of the host stomach. Exhibits a chaperone-like activity at acidic pH by preventing the aggregation of many different periplasmic proteins. Belongs to the HdeB family. | Protein hdeD. | 0.745 |
| hdeD | gadC | CH53_2315 | CH53_47 | Protein hdeD. | Amino acid permease family protein. | 0.850 |
| hdeD | hdeB_1 | CH53_2315 | CH53_4381 | Protein hdeD. | hdeA/HdeB family protein; Required for optimal acid stress protection, which is important for survival of enteric bacteria in the acidic environment of the host stomach. Exhibits a chaperone-like activity at acidic pH by preventing the aggregation of many different periplasmic proteins. Belongs to the HdeB family. | 0.745 |