STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntHManganese transport protein mntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. (409 aa)    
Predicted Functional Partners:
mntB_1
ABC 3 transport family protein.
   
  
 0.532
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
  
 0.502
copA_3
ATPase-IB1_Cu: copper-translocating P-type ATPase.
  
 
 0.502
CH53_4247
Periplasmic solute binding family protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.491
znuB
ABC 3 transport family protein.
   
  
 0.486
mntB_3
ABC 3 transport family protein.
   
  
 0.486
mntB_4
ABC 3 transport family protein.
   
  
 0.486
ybgL
lamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
  
 0.461
CH53_3132
Hypothetical protein.
  
  
 0.419
kipI
Allophanate hydrolase subunit 1 family protein.
  
  
 0.400
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.