STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
proXSubstrate binding domain of ABC-type glycine betaine transport system family protein. (334 aa)    
Predicted Functional Partners:
proV
proV: glycine betaine/L-proline transport ATP binding subunit.
 
 0.999
proW
Binding--dependent transport system inner membrane component family protein.
 
 0.999
mtlR
Mannitol operon repressor.
  
     0.558
opuBC
Substrate binding domain of ABC-type glycine betaine transport system family protein.
   
 
 0.501
yecS_3
HEQRo_perm_3TM: amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein.
  
  
  0.467
malF
Binding--dependent transport system inner membrane component family protein.
  
  
 0.445
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.438
ybjP
Putative lipoprotein YbjP.
  
     0.435
yehY
Binding--dependent transport system inner membrane component family protein.
 
  
 0.435
mlaE_2
Putative phospholipid ABC transporter permease protein mlaE.
     
 0.434
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.