STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0CZ74DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1044 aa)    
Predicted Functional Partners:
A0A0K0DIL0
RPOLD domain-containing protein.
  
 0.985
A0A0K0DCT2
Uncharacterized protein.
  
 0.980
A0A0K0DEB6
Uncharacterized protein.
  
 0.978
A0A0K0DLW4
Uncharacterized protein.
    
 0.971
A0A0K0CWL6
Uncharacterized protein.
   
 0.970
A0A0K0DBD4
Uncharacterized protein.
   
 0.968
A0A0K0DHF9
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.968
A0A0K0DAH6
S1 domain-containing protein.
    
 0.967
A0A0K0DBA8
Transcription elongation factor SPT5.
   
 0.961
A0A0K0CZM7
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.955
Your Current Organism:
Angiostrongylus cantonensis
NCBI taxonomy Id: 6313
Other names: A. cantonensis, rat lungworm
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