STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC23876.1PFAM: Calcineurin-like phosphoesterase; TIGRFAM: polynucleotide kinase-phosphatase. (849 aa)    
Predicted Functional Partners:
EIC23875.1
PFAM: Methyltransferase domain; TIGRFAM: 3' terminal RNA ribose 2'-O-methyltransferase Hen1.
     0.947
EIC21342.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
 
 
   0.818
EIC23841.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
   
   0.782
EIC22841.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
   
   0.782
ubiG
Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
   
   0.782
cmoB
Protein of unknown function (DUF1698); Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.
   
   0.782
EIC21358.1
PFAM: Magnesium-protoporphyrin IX methyltransferase C-terminus; TIGRFAM: magnesium protoporphyrin O-methyltransferase.
   
   0.782
EIC22323.1
Hypothetical protein.
   
   0.782
EIC22544.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
   
   0.782
EIC19553.1
Hypothetical protein.
   
   0.782
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.