STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC23848.1PFAM: TraE protein; TIGRFAM: type IV conjugative transfer system protein TraE. (191 aa)    
Predicted Functional Partners:
EIC23849.1
PFAM: TraK protein; partial gene.
       0.764
EIC23847.1
PFAM: TraL protein; TIGRFAM: type IV conjugative transfer system protein TraL.
       0.578
EIC23851.1
PFAM: Bacterial conjugation TrbI-like protein.
       0.536
EIC23850.1
PFAM: TraK protein; manually curated; partial gene.
       0.529
EIC23846.1
Hypothetical protein.
       0.420
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.