STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC23867.1TIGR02452 family protein; PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; Uncharacterized protein conserved in bacteria (DUF2263); TIGRFAM: TIGR02452 family protein. (372 aa)    
Predicted Functional Partners:
EIC23876.1
PFAM: Calcineurin-like phosphoesterase; TIGRFAM: polynucleotide kinase-phosphatase.
 
     0.618
EIC23875.1
PFAM: Methyltransferase domain; TIGRFAM: 3' terminal RNA ribose 2'-O-methyltransferase Hen1.
  
     0.609
EIC23834.1
TIGRFAM: PRTRC system protein D; manually curated.
  
     0.545
EIC24006.1
PFAM: Mating pair stabilisation protein TraN.
  
     0.480
EIC22829.1
PFAM: Vault protein inter-alpha-trypsin; von Willebrand factor type A domain.
  
     0.480
EIC22804.1
PFAM: Mating pair stabilisation protein TraN.
  
     0.470
EIC23879.1
PFAM: Bacterial conjugation TrbI-like protein.
  
     0.445
EIC23851.1
PFAM: Bacterial conjugation TrbI-like protein.
  
     0.441
EIC21171.1
Hypothetical protein.
  
     0.422
EIC23928.1
Putative phage-type endonuclease; PFAM: YqaJ-like viral recombinase domain; TIGRFAM: putative phage-type endonuclease.
  
     0.420
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.