STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC22797.1PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; TIGRFAM: type-IV secretion system protein TraC. (800 aa)    
Predicted Functional Partners:
EIC22801.1
PFAM: TraU protein.
 
   
 0.950
EIC22800.1
PFAM: Type-F conjugative transfer system pilin assembly protein.
 
     0.949
EIC22799.1
PFAM: Peptidase S26; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
 
   
 0.945
EIC22804.1
PFAM: Mating pair stabilisation protein TraN.
 
   
 0.893
EIC23905.1
Conjugative coupling factor TraD, SXT/TOL subfamily; PFAM: Type IV secretion-system coupling protein DNA-binding domain; TIGRFAM: conjugative coupling factor TraD, SXT/TOL subfamily.
 
  
 0.807
EIC23838.1
Conjugative coupling factor TraD, SXT/TOL subfamily; PFAM: Type IV secretion-system coupling protein DNA-binding domain; TIGRFAM: conjugative coupling factor TraD, SXT/TOL subfamily.
 
  
 0.807
EIC23879.1
PFAM: Bacterial conjugation TrbI-like protein.
 
   
 0.792
EIC23851.1
PFAM: Bacterial conjugation TrbI-like protein.
 
   
 0.792
EIC24008.1
PFAM: TraU protein.
 
   
 0.788
EIC23913.1
Muramidase (phage lambda lysozyme); PFAM: TraG-like protein, N-terminal region.
 
   
 0.787
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.