STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC23134.1Hypothetical protein; PFAM: Hemerythrin HHE cation binding domain; Protein of unknown function (DUF2397). (198 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.775
EIC20586.1
Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; PFAM: Cytochrome c bacterial; Cytochrome c552.
  
     0.572
EIC23133.1
K+ transport system, NAD-binding component; PFAM: Ion channel; TrkA-N domain.
       0.562
EIC23136.1
PFAM: Protein of unknown function (DUF971).
       0.514
EIC20007.1
Hypothetical protein; PFAM: Family of unknown function (DUF490).
  
     0.437
EIC23132.1
Hypothetical protein.
       0.432
EIC20584.1
nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit; PFAM: Doubled CXXCH motif (Paired_CXXCH_1).
  
     0.408
EIC20650.1
Protoporphyrinogen oxidase; PFAM: FAD dependent oxidoreductase.
  
     0.403
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.