STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC23197.1PFAM: Predicted periplasmic protein (DUF2233). (275 aa)    
Predicted Functional Partners:
ychF
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.773
EIC19898.1
Putative transcriptional regulator.
  
     0.753
EIC19615.1
Putative transcriptional regulator.
  
     0.728
EIC23506.1
Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain.
  
     0.676
EIC23862.1
Hypothetical protein; PFAM: Alpha/beta hydrolase of unknown function (DUF900).
  
     0.660
EIC23553.1
Hypothetical protein; PFAM: Alpha/beta hydrolase of unknown function (DUF900).
  
     0.652
EIC22583.1
Hypothetical protein.
  
     0.588
EIC23834.1
TIGRFAM: PRTRC system protein D; manually curated.
  
     0.579
EIC19497.1
Site-specific recombinase XerD; PFAM: Phage integrase family.
  
     0.564
EIC22122.1
Putative membrane protein; PFAM: Fusaric acid resistance protein family.
  
     0.548
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.