STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC23209.1PFAM: PhoH-like protein. (472 aa)    
Predicted Functional Partners:
EIC23210.1
Peroxiredoxin; PFAM: AhpC/TSA family.
       0.601
EIC23549.1
PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
   
  
 0.512
EIC23211.1
Glycine cleavage system regulatory protein; PFAM: ACT domain.
       0.507
EIC23548.1
PFAM: Protein of unknown function (DUF444); Belongs to the UPF0229 family.
   
    0.478
EIC22756.1
Ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
  
    0.445
EIC23213.1
PFAM: NlpB/DapX lipoprotein.
 
     0.423
EIC23547.1
PFAM: SpoVR like protein.
   
    0.414
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.412
EIC21172.1
FAD/FMN-dependent dehydrogenase; PFAM: Cysteine-rich domain; FAD binding domain; Protein of unknown function (DUF3683); Domain of unknown function (DUF3400); FAD linked oxidases, C-terminal domain.
  
   
 0.409
rne
Ribonuclease, Rne/Rng family; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.
  
    0.400
Your Current Organism:
Thiorhodovibrio sp. 970
NCBI taxonomy Id: 631362
Other names: T. sp. 970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.